emseq

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An efficient, documented, reproducible Snakemake methylation analysis pipeline for BS-seq and EM-seq samples, including cfDNA.

snakemake pipeline methylation epigenetics bisulfite bs-seq bsseq em-seq emseq

Convert methylation data to sparse objects for machine learning.

Snakemake workflow for the processing of EMseq data

Reproducible Nextflow pipeline for EMseq data processing and methylation analysis.

nextflow methylation epigenetics emseq

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