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1. Jolly-Seber-N-Prior-DA Jolly-Seber-N-Prior-DA Public

   Jolly-Seber MCMC samplers using N-prior data augmentation

   R

2. SCR-N-Prior-Data-Augmentation SCR-N-Prior-Data-Augmentation Public

   Count Prior Data Augmentation for SCR models.

   R

3. RoyleYoung RoyleYoung Public

   Royle Young models for area or transect searches where you detect individuals (not their sign). Density and resource selection. Data simulators and files to fit models in nimble. Known ID versions …

   R

4. genotype-SPIM genotype-SPIM Public

   Spatial capture-recapture accouting for genotyping error

   R 4 1

5. Spatial-Mark-Resight-Marginal Spatial-Mark-Resight-Marginal Public

   SMR samplers marginalizing out latent individual IDs

   R 2

6. Spatial-Mark-Resight-Open-Marginal Spatial-Mark-Resight-Open-Marginal Public

   Open population SMR samplers marginalizing out latent individual IDs

   R