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test: raise coverage to 100%, gate CI at 95% (#19)
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test: raise coverage to 100%, gate CI at 95%
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Merge pull request #18 from OmniBioAI/chore/fix-ruff-lint-findings
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chore: fix ruff lint findings, restore green CI lint gate
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Merge pull request #17 from OmniBioAI/docs/update-readme-post-hardening
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docs: update README to reflect security hardening, config wiring, and dev/test setup changes
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Merge pull request #16 from OmniBioAI/chore/split-dev-requirements
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chore: split dev/test dependencies into requirements-dev.txt
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Merge pull request #15 from OmniBioAI/fix/dockerfile-jwt-secret-fallback
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fix: fail container startup when JWT_SECRET is unset instead of falling back to 'change-me' in nginx config
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Merge pull request #14 from OmniBioAI/fix/jwt-secret-empty-auth-bypass
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fix: fail startup when AUTH_ENABLED=true and JWT_SECRET is unset (closes silent auth bypass)
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Merge pull request #13 from OmniBioAI/test/auth-and-frontend-ci
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test: add auth unit tests and wire frontend into CI
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Merge pull request #12 from OmniBioAI/docs/document-debug-tracebacks-…
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docs: document DEBUG_TRACEBACKS env var
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Merge pull request #11 from OmniBioAI/fix/security-hardening
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fix: gate traceback disclosure behind DEBUG_TRACEBACKS flag, run container as non-root
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Merge pull request #10 from OmniBioAI/feat/wire-configs-into-build-index
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feat: read repo list and model name from config files, defaulting to prior hardcoded behavior
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feat/wire-configs-into-build-index
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Merge pull request #9 from OmniBioAI/chore/pin-requirements
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chore: pin requirements.txt to known-working versions
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Merge pull request #8 from OmniBioAI/chore/remove-empty-stub-modules
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chore: remove zero-byte stub modules with no references (duplicated inline in rag/engine.py)
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Merge pull request #7 from OmniBioAI/fix/exclude-production-readiness…
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