Skip to content
@3dem

3dem

Pinned Loading

  1. relion relion Public

    Image-processing software for cryo-electron microscopy

    C++ 555 237

  2. relion-documents relion-documents Public

    Documentations for RELION

    TeX 15 12

  3. model-angelo model-angelo Public

    Automatic atomic model building program for cryo-EM maps

    Python 174 29

  4. DynaMight DynaMight Public

    Tool for reconstruction and analysis of continuous heterogeneity of a cryo-EM dataset

    Python 34 10

  5. topaz topaz Public

    Forked from tbepler/topaz

    Pipeline for particle picking in cryo-electron microscopy images using convolutional neural networks trained from positive and unlabeled examples. Also featuring micrograph and tomogram denoising w…

    Jupyter Notebook 8 5

  6. relion-blush relion-blush Public

    Blush refinement - For use in RELION-5

    Python 9 5

Repositories

Showing 10 of 21 repositories
  • emtools Public

    Basic utilities for CryoEM data manipulation

    3dem/emtools's past year of commit activity
    Python 5 GPL-3.0 1 1 2 Updated Sep 18, 2026
  • emwrap Public

    Python wrappers for CryoEM programs

    3dem/emwrap's past year of commit activity
    Python 1 GPL-3.0 0 1 3 Updated Sep 18, 2026
  • emhub Public

    Web application for monitor EM results

    3dem/emhub's past year of commit activity
    Python 14 GPL-3.0 6 8 1 Updated Sep 17, 2026
  • relion Public

    Image-processing software for cryo-electron microscopy

    3dem/relion's past year of commit activity
    C++ 555 GPL-2.0 237 254 (5 issues need help) 23 Updated Sep 16, 2026
  • emhub-tomo Public

    Repo for EMhub-tomo documentation

    3dem/emhub-tomo's past year of commit activity
    Shell 0 0 0 0 Updated Sep 10, 2026
  • relion-documents Public

    Documentations for RELION

    3dem/relion-documents's past year of commit activity
    TeX 15 GPL-3.0 12 3 1 Updated Aug 13, 2026
  • model-angelo Public

    Automatic atomic model building program for cryo-EM maps

    3dem/model-angelo's past year of commit activity
    Python 174 MIT 29 42 2 Updated Jun 15, 2026
  • qscore Public

    Q-score in pure Python without requiring Chimera

    3dem/qscore's past year of commit activity
    Python 4 MIT 2 0 0 Updated Jun 10, 2026
  • APD Public

    Amyloid Packing Difference

    3dem/APD's past year of commit activity
    Python 5 MIT 4 0 0 Updated Apr 8, 2026
  • topaz Public Forked from tbepler/topaz

    Pipeline for particle picking in cryo-electron microscopy images using convolutional neural networks trained from positive and unlabeled examples. Also featuring micrograph and tomogram denoising with DNNs.

    3dem/topaz's past year of commit activity
    Jupyter Notebook 8 GPL-3.0 75 0 3 Updated Jan 8, 2026

Top languages

Loading…

Most used topics

Loading…