Skip to content

(Pathway)<-[inferredTo]<-(Pathway): Both Pathways have "isInferred": false #3

Description

@dvklopfenstein

Thanks for making the amazing Reactome database available to the research community. Storing the Reactome data in a graph database is an astute move.

Is it correct for both (Pathway)s to have the parameter, isInferred returned as set to false When I do this query?:

MATCH (hi:Pathway{stId:"R-HSA-9613829"})<-[inferredTo]-(lo:Pathway) RETURN hi, lo

I see that both Pathways have the parameter, isInferred set to false. Shouldn't one of them be true?

hi

{
  "schemaClass": "Pathway",
  "isInDisease": false,
  "releaseDate": "2019-06-12",
  "displayName": "Chaperone Mediated Autophagy",
  "stId": "R-HSA-9613829",
  "speciesName": "Homo sapiens",
  "diagramHeight": 1817,
  "stIdVersion": "R-HSA-9613829.3",
  "dbId": 9613829,
  "releaseStatus": "UPDATED",
  "name": [
    "Chaperone Mediated Autophagy"
  ],
  "hasDiagram": true,
  "isInferred": false,
  "doi": "10.3180/R-HSA-9613829.1",
  "diagramWidth": 2185
}

lo

{
  "schemaClass": "TopLevelPathway",
  "isInDisease": false,
  "releaseDate": "2019-06-12",
  "displayName": "Autophagy",
  "stId": "R-HSA-9612973",
  "speciesName": "Homo sapiens",
  "diagramHeight": 338,
  "hasEHLD": true,
  "stIdVersion": "R-HSA-9612973.1",
  "dbId": 9612973,
  "releaseStatus": "UPDATED",
  "name": [
    "Autophagy"
  ],
  "hasDiagram": true,
  "isInferred": false,
  "doi": "10.3180/r-hsa-1632852.1",
  "diagramWidth": 626
}

Activity

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type

    Projects

    No projects

      Milestone

      No milestone

      Relationships

      None yet

      Development

      No branches or pull requests

      Issue actions